Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs1329115 | chr1:89562606 | A/G | 3.15E-6 | 210 | 10.83 | 18 | 16.7 | KM Plot |
| KIRP | rs1329116 | chr1:89562821 | C/G | 5.25E-6 | 207 | 9.77 | 19.92 | 15.65 | KM Plot |
| KIRP | rs1329119 | chr1:89574026 | G/A | 6.95E-5 | 214 | 9.77 | 19.68 | 14.53 | KM Plot |
| KIRP | rs1329121 | chr1:89596425 | C/A | 9.32E-5 | 212 | 10 | 19.4 | 14.53 | KM Plot |
| KIRP | rs13316695 | chr3:49684917 | C/G | 0.000534 | 214 | 14.13 | 16.97 | 19.53 | KM Plot |
| KIRP | rs13330134 | chr16:4526923 | T/G | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs13330957 | chr16:4525330 | G/C | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs13331126 | chr16:4525013 | C/T | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs13331982 | chr16:4537808 | C/T | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs13332058 | chr16:47617618 | A/T | 7.92E-8 | 213 | 17.2 | 12.9 | 12.85 | KM Plot |
| KIRP | rs13332953 | chr16:47594583 | T/G | 7.93E-8 | 214 | 17.6 | 12.32 | 12.85 | KM Plot |
| KIRP | rs13334342 | chr16:47530430 | T/C | 8.97E-8 | 213 | 17.2 | 12.32 | 12.85 | KM Plot |
| KIRP | rs13335503 | chr16:4529028 | T/C | 3.38E-6 | 213 | 16.47 | 12.63 | 10.83 | KM Plot |
| KIRP | rs13338199 | chr16:4538008 | T/C | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs13341834 | chr17:8654875 | A/T | 0.000485 | 214 | 42.03 | 7.73 | 17.02 | KM Plot |